Computer-assisted counting of retinal cells by automatic segmentation after TV denoising

Bredies, Kristian; Wagner, Marcus; Schubert, Christian; Ahnelt, Peter

doi:10.1186/1471-2415-13-59

BMC Ophthalmology

Table 1 Retinal image data

From: Computer-assisted counting of retinal cells by automatic segmentation after TV denoising

No.	Species	Eye	Retina region	Labeled structures	Staining	Density per mm²	File name	Image size	Remarks about image quality and particularities	Shown in Figure(s)
1	Orangutan	Left	Sup. periphery,	S-cones,	JH455/DAB,	190 (cones)	OrangWhM	1024 ×854	Sufficient quality,	1A
			between 10 mm from	blood vessels	Collagen IV/DAB				but vessels present
			fovea and ora serrata
2	Orangutan	Left	Inf. periphery,	S-cones,	JH455/DAB,	156 (cones)	OrUinf-0001pr	1026 ×854	Sufficient quality,	4I–J
			between 11 mm from	blood vessels	Collagen IV/DAB				but vessels present
			fovea and ora serrata
3	Domestic cat			S-cones	JH455/DAB	860	loStack	1024 ×1024	Sufficient quality and contrast,
									but small cones
4	Domestic cat		Inf. retina	S-cones	JH455/DAB	851	luStack	1024 ×1024	Sufficient quality and contrast,	1B
									but small cones
5	Domestic cat			S-cones	JH455/DAB	827	roStack	1024 ×1024	Sufficient quality and contrast,
									but small cones
6	Domestic cat			S-cones	JH455/DAB	904	ruStack	1024 ×1024	Sufficient quality and contrast,
									but small cones
7	Manul			S-cones	JH455/DAB	195	bcergcomp	1024 ×1024	Sufficient quality and contrast,
									but small cones
8	Eurasian Lynx	Left	Periphery	S-cones	JH455/DAB	1076	Movie-17-1	1024 ×1024	Good quality and contrast	4A–B
9	Cheetah			S-cones	JH455/DAB	130	1+5CSCStack	1024 ×1024	Good quality and contrast
10	Cheetah			S-cones	JH455/DAB	1055	Stack SCFoc.	1024 ×1024	Good quality and contrast
11	Jaguar	Right	Periphery	S-cones,	JH455/DAB	440 (cones)	Combination	1024 ×1024	Good quality, but additional	1C, 4G–H
				horizontal cells					cell type present
12	Pangolin	Right	Mid periphery	M-/L-cones	JH492/DAB	2290	492_20_09	1024 ×1024	Background very blotchy	1D, 2A–F,
										4C–D
13	Agouti	Left	Sup. temp.	S-cones	JH455/DAB	705	A4scal	1024 ×853	Low contrast, cell debris present	1E
			periphery
14	Agouti			S-cones	JH455/DAB	790	A5scal	1024 ×853	Low contrast, cell debris present
15	Agouti			S-cones	JH455/DAB	855	A6scal	1024 ×853	Low contrast, cell debris present
16	Agouti	left	Temp. periphery	S-cones	JH455/DAB	480	B1scal	1024 ×853	Poor quality, cell debris present	1F, 4E–F
17	Agouti			S-cones	JH455/DAB	905	B2scal	1024 ×853	Poor quality, cell debris present
18	Agouti			S-cones	JH455/DAB	3500	C4scal	1024 ×853	Poor quality, cell debris present

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ISSN: 1471-2415

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