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Table 2 Summary of 16S rDNA clone library analysis of the infected buckle material

From: Achromobacter buckle infection diagnosed by a 16S rDNA clone library analysis: a case report

Sequence typea)

No. of cloneb)

Best matchc)

ST1

12

Achromobacter spanius strain LMG 5911 (631/633; 99.7%)

ST2

1

Achromobacter spanius strain LMG 5911 (628/631; 99.5%)

ST3

1

Achromobacter spanius strain LMG 5911 (628/632; 99.4%)

ST4

1

Achromobacter spanius strain LMG 5911 (627/630; 99.5%)

ST5

1

Achromobacter spanius strain LMG 5911 (630/632; 99.7%)

ST6

1

Achromobacter spanius strain LMG 5911 (623/625; 99.7%)

ST7

1

Achromobacter spanius strain LMG 5911 (627/628; 99.8%)

ST8

1

Achromobacter spanius strain LMG 5911 (630/632; 99.7%)

ST9

1

Achromobacter spanius strain LMG 5911 (627/628; 99.8%)

ST10

1

Achromobacter spanius strain LMG 5911 (624/625; 99.8%)

  1. a)Twenty-one 16S rDNA sequences obtained (631 bp of high quality sequence) are classified basing on SNIPs.
  2. b)Number of sequence belonging to each sequence type is shown.
  3. c)Top hit microorganisims by which Blastn search of each sequence type indicated are listed.
  4. The number in parenthesis shows identical base (bp)/alignment length (bp) to 16S rDNA from indicated species.
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BMC Ophthalmology

ISSN: 1471-2415

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