Table 1 Top 20 differentially expressed lncRNAs in TGF-β2 group compared to control group
Up-regulated lncRNAs | Down-regulated lncRNAs | ||||||
|---|---|---|---|---|---|---|---|
LncRNA | Source | p-values | Fold change | LncRNA | Source | p-values | Fold change |
lnc-PMEPA1-2:1 | Lncipedia | 0.00455517 | 15.830 | NR_033931 | RefSeq | 0.00022164 | 13.756 |
ENST00000597865 | GENCODE | 0.00020187 | 12.737 | ENST00000582120 | GENCODE | 0.00308787 | 12.854 |
lnc-ZNF737-1:1 | Lncipedia | 0.01317849 | 12.647 | lnc-FAIM3-2:1 | Lncipedia | 3.51412E-05 | 12.313 |
lnc-PCK1-2:1 | Lncipedia | 0.00250698 | 12.061 | ENST00000580242 | GENCODE | 0.00355059 | 10.021 |
lnc-RIOK2-5:1 | Lncipedia | 4.6625E-06 | 10.882 | NR_110260 | RefSeq | 0.00718676 | 9.901 |
lnc-ABCA12-5:2 | Lncipedia | 0.00043109 | 10.147 | ENST00000508352 | GENCODE | 0.00010915 | 9.486 |
lnc-SMAD5-7:1 | Lncipedia | 1.89988E-05 | 9.649 | lnc-SIX3-3:1 | Lncipedia | 0.00093703 | 8.399 |
ENST00000558888 | GENCODE | 0.00121548 | 8.765 | NR_033888 | RefSeq | 0.00173551 | 5.851 |
ENST00000606197 | GENCODE | 0.00469381 | 8.533 | NR_033931 | RefSeq | 0.00080852 | 5.791 |
ENST00000591217 | GENCODE | 0.00195645 | 8.503 | lnc-PSG6-3:1 | Lncipedia | 0.00369578 | 5.391 |
NR_125383 | RefSeq | 0.00016452 | 8.302 | ENST00000562459 | GENCODE | 0.00108506 | 5.383 |
NR_033957 | RefSeq | 0.00071386 | 8.289 | ENST00000513853 | GENCODE | 0.02789757 | 5.259 |
ENST00000540392 | GENCODE | 0.00051516 | 7.495 | NR_110294 | RefSeq | 0.02014080 | 5.164 |
ENST00000603720 | GENCODE | 0.00085945 | 7.098 | NR_038929 | RefSeq | 0.00114790 | 4.993 |
lnc-ABCA12-6:1 | Lncipedia | 0.00232021 | 7.083 | NR_049793 | RefSeq | 0.00317515 | 4.978 |
ENST00000508884 | GENCODE | 0.00243957 | 6.931 | NR_027995 | RefSeq | 0.00158735 | 4.929 |
ENST00000557900 | GENCODE | 0.00351377 | 6.719 | lnc-PSG4-1:1 | Lncipedia | 0.00025116 | 4.855 |
ENST00000606197 | GENCODE | 0.01581059 | 6.615 | ENST00000508352 | GENCODE | 0.00557057 | 4.814 |
NR_015410 | RefSeq | 0.00494265 | 6.552 | ENST00000605586 | GENCODE | 0.00670910 | 4.800 |
NR_109998 | RefSeq | 0.00169954 | 6.531 | lnc-ABCD3-1:2 | Lncipedia | 0.00791576 | 4.786 |