SNP ID | Chr | Position | Function | Ref allele | Alt allele | Nearby/containing Gene | Global EAF | AMR EAF | AMR log10 P | AFR EAF | AFR log10 P | EAS EAF | EAS log10 P | SAS EAF | SAS log10 P | EUR EAF | EUR log10 P | KOR EAF | KOR log10 P |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rs10033900 | chr4 | 110,659,067 | intergenic | T | C | CFI | 0.49 | 0.53 | 1.06 | 0.66 | 27.44 | 0.39 | −8.01 | 0.31 | −23.92 | 0.54 | 2.30 | 0.34 | −43.57 |
rs10781182 | chr9 | 76,617,720 | intergenic | T | G | MIR6130/RORB | 0.46 | 0.54 | 3.26 | 0.15 | −101.56 | 0.49 | 1.04 | 0.53 | 3.66 | 0.70 | 42.77 | 0.41 | −4.43 |
rs10922109 | chr1 | 196,704,632 | intronic | C | A | CFH | 0.51 | 0.55 | 1.06 | 0.56 | 2.79 | 0.44 | −4.05 | 0.56 | 2.15 | 0.43 | −5.16 | 0.47 | −3.33 |
rs11080055 | chr17 | 26,649,724 | intronic | A | C | TMEM97/VTN | 0.58 | 0.58 | 0.00 | 0.61 | 1.23 | 0.72 | 16.01 | 0.48 | −7.41 | 0.49 | −6.53 | 0.76 | 64.55 |
rs1142 | chr7 | 104,756,326 | downstream | C | T | KMT2E/SRPK2 | 0.31 | 0.33 | 0.31 | 0.27 | −2.23 | 0.37 | 3.55 | 0.23 | −5.81 | 0.36 | 2.56 | 0.34 | 1.89 |
rs11884770 | chr2 | 228,086,920 | ncRNA_intronic | T | C | COL4A3 | 0.67 | 0.72 | 1.62 | 0.49 | −31.04 | 0.78 | 11.41 | 0.73 | 3.30 | 0.71 | 1.76 | 0.76 | 20.03 |
rs12019136 | chr19 | 5,835,677 | intronic | G | A | C3 | 0.15 | 0.05 | −14.85 | 0.32 | 39.45 | 0.14 | −0.34 | 0.14 | −0.31 | 0.04 | −24.78 | 0.08 | −23.98 |
rs12357257 | chr10 | 24,999,593 | intronic | G | A | ARHGAP21 | 0.14 | 0.17 | 1.07 | 0.11 | −2.37 | 0.05 | −15.48 | 0.16 | 0.79 | 0.25 | 15.64 | 0.03 | −65.27 |
rs13081855 | chr3 | 99,481,539 | ncRNA_intronic | G | T | COL8A1/FILIP1L | 0.07 | 0.06 | −0.31 | 0.03 | −4.92 | 0.05 | −1.23 | 0.10 | 3.36 | 0.10 | 3.01 | 0.03 | −15.11 |
rs1626340 | chr9 | 101,923,372 | intergenic | G | A | TGFBR1/COL15A1 | 0.29 | 0.25 | −1.07 | 0.29 | 0.00 | 0.46 | 23.83 | 0.24 | −2.47 | 0.21 | −6.58 | 0.51 | 95.30 |
rs181705462 | chr6 | 31,947,027 | intronic | G | T | C2/CFB/SKIV2L | 0.01 | 0.01 | 0.00 | 0.01 | 0.18 | 0.00 | −1.52 | 0.02 | 0.66 | 0.01 | 0.38 | 0.00 | −4.86 |
rs2043085 | chr15 | 58,680,954 | intergenic | T | C | AQP9;LIPC | 0.49 | 0.62 | 8.95 | 0.36 | −16.28 | 0.50 | 0.23 | 0.44 | −2.15 | 0.63 | 15.08 | 0.48 | −0.30 |
rs2230199 | chr19 | 6,718,387 | exonic | G | C | C3 | 0.09 | 0.10 | 0.31 | 0.03 | −11.70 | 0.00 | −30.53 | 0.10 | 0.66 | 0.22 | 28.35 | 0.00 | −97.67 |
rs2740488 | chr9 | 107,661,742 | intronic | A | C | ABCA1 | 0.33 | 0.28 | −1.62 | 0.43 | 10.40 | 0.24 | −7.72 | 0.38 | 2.29 | 0.25 | −6.05 | 0.26 | −12.12 |
rs3138141 | chr12 | 56,115,778 | ncRNA_intronic | C | A | RDH5/CD63/MMP19 | 0.15 | 0.11 | −1.86 | 0.01 | −61.21 | 0.12 | −1.76 | 0.38 | 53.57 | 0.19 | 2.57 | 0.07 | −32.36 |
rs3750846 | chr10 | 124,215,565 | intronic | T | C | ARMS2/HTRA1 | 0.29 | 0.25 | −1.07 | 0.26 | −1.44 | 0.41 | 12.35 | 0.34 | 2.47 | 0.19 | −10.25 | 0.42 | 32.52 |
rs429358 | chr19 | 45,411,941 | exonic | T | C | APOE | 0.15 | 0.10 | −2.81 | 0.27 | 21.51 | 0.09 | −7.38 | 0.09 | −6.61 | 0.16 | 0.37 | 0.09 | −14.75 |
rs55975637 | chr3 | 99,419,853 | ncRNA_intronic | G | A | COL8A1 | 0.08 | 0.08 | −0.04 | 0.05 | −2.62 | 0.06 | −1.52 | 0.09 | 0.40 | 0.12 | 4.31 | 0.03 | −20.71 |
rs570618 | chr1 | 196,657,064 | intronic | T | G | CFH | 0.78 | 0.78 | 0.00 | 0.81 | 1.71 | 0.95 | 43.09 | 0.71 | −4.95 | 0.64 | −18.54 | 0.92 | 72.90 |
rs5754227 | chr22 | 33,105,817 | intronic | T | C | SYN3/TIMP3 | 0.37 | 0.39 | 0.31 | 0.56 | 33.60 | 0.61 | 42.65 | 0.12 | −57.77 | 0.13 | −53.79 | 0.67 | 167.56 |
rs61818925 | chr1 | 196,815,450 | intergenic | T | G | CFHR1 | 0.59 | 0.52 | −2.60 | 0.72 | 17.39 | 0.41 | −24.37 | 0.69 | 7.77 | 0.58 | −0.26 | 0.50 | −15.15 |
rs61985136 | chr14 | 68,769,199 | intronic | C | T | RAD51B | 0.45 | 0.60 | 11.79 | 0.13 | −110.82 | 0.45 | 0.00 | 0.63 | 23.38 | 0.58 | 12.87 | 0.42 | −2.45 |
rs62247658 | chr3 | 64,715,155 | ncRNA_intronic | C | T | ADAMTS9-AS2 | 0.28 | 0.29 | 0.15 | 0.13 | −30.69 | 0.24 | −1.92 | 0.22 | −3.58 | 0.56 | 60.51 | 0.20 | −15.79 |
rs6565597 | chr17 | 79,526,821 | intronic | C | T | NPLOC4/TSPAN10 | 0.24 | 0.23 | −0.15 | 0.16 | −9.47 | 0.21 | −1.28 | 0.26 | 0.66 | 0.36 | 13.46 | 0.21 | −2.48 |
rs67538026 | chr19 | 1,031,438 | intronic | C | T | CNN2 | 0.38 | 0.33 | −1.54 | 0.15 | −60.48 | 0.52 | 15.07 | 0.49 | 8.86 | 0.45 | 4.28 | 0.50 | 24.75 |
rs72802342 | chr16 | 75,234,872 | intergenic | C | A | CTRB2/CTRB1 | 0.06 | 0.06 | 0.00 | 0.01 | −21.05 | 0.13 | 11.80 | 0.04 | −1.35 | 0.08 | 1.56 | 0.11 | 15.95 |
rs73036519 | chr19 | 45,748,362 | intergenic | G | C | EXOC3L2/MARK4 | 0.23 | 0.17 | −2.80 | 0.36 | 19.67 | 0.00 | −98.90 | 0.29 | 3.66 | 0.29 | 4.05 | 0.00 | − 284.04 |
rs7803454 | chr7 | 99,991,548 | intronic | C | T | PILRB/PILRA | 0.09 | 0.11 | 1.00 | 0.03 | −16.28 | 0.03 | −11.57 | 0.11 | 1.42 | 0.19 | 18.37 | 0.02 | −37.14 |
rs8135665 | chr22 | 38,476,276 | intronic | C | T | SLC16A8 | 0.25 | 0.31 | 2.43 | 0.37 | 16.33 | 0.14 | −14.06 | 0.20 | −2.76 | 0.22 | −1.32 | 0.10 | −65.11 |
rs943080 | chr6 | 43,826,627 | intergenic | C | T | VEGFA | 0.67 | 0.52 | −12.42 | 0.83 | 30.61 | 0.73 | 3.60 | 0.67 | 0.00 | 0.51 | −20.22 | 0.67 | 0.14 |
rs9564692 | chr13 | 31,821,240 | intronic | C | T | B3GALTL | 0.50 | 0.51 | 0.15 | 0.45 | −2.79 | 0.71 | 33.55 | 0.54 | 1.42 | 0.33 | −22.06 | 0.73 | 101.51 |